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Development and Mining of a Human Biomarker Database

Shaikh Farhad Hossain, Mohammad Bozlul Karim,Takematsu Shotaro, Shigehiko Kanaya and Md. Altaf-Ul-Amin
Computational Systems Biology Lab Graduate School of Information Science, Nara Institute of Science and Technology, 8916-5, Takayama, Ikoma, Nara 630-0192, Japan

Abstract—Biomarkers are the indicator of a biological state or naturally occurring molecule, gene, or characteristic whose detection indicates the presence of a disease in a living organism. Biomarkers have played an important role in medicine for improving disease diagnosis and prognosis. The biomarker is a key factor in the analysis of diseases and also for analyzing inter disease relations. There is no open source comprehensive online biomarker database. We design and develop a biomarker database based on the preceding research paper, medical report and reliable URL. This biomarker database might be helpful instrumental in identifying a new approach to treat a new disease. This biomarkers database will provide information on different diseases, protein, biochemical, metabolite that cover 5000 above diseases and biomarkers association. Information is gathered from multiple sources which include NBCI, published patents, Clinical Trials, Data from the scientific conference, PMA database, FDA, EMEA, PMDA approved documents, google scholar, PubMed and regulatory-approved documents.

Index Terms—biomarkers, NBCI, personalized medicine, PubChem ID, KNApSAcK database

Cite:Shaikh Farhad Hossain, Mohammad Bozlul Karim,Takematsu Shotaro, Shigehiko Kanaya and Md. Altaf-Ul-Amin, "Development and Mining of a Human Biomarker Database," International Journal of Pharma Medicine and Biological Sciences, Vol. 9, No. 1, pp. 27-32, January 2020. doi: 10.18178/ijpmbs.9.1.27-32

Copyright © 2020 by the authors. This is an open access article distributed under the Creative Commons Attribution License (CC BY-NC-ND 4.0), which permits use, distribution and reproduction in any medium, provided that the article is properly cited, the use is non-commercial and no modifications or adaptations are made.

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